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    <title>Çağatay Özcan Jagiello Gutt - Thoughts &amp; Updates</title>
    <subtitle>Cognitive Science Student (M.Sc.) &amp; Molecular Biologist (B.Sc.) | Artificial Consciousness, BCI &amp; HMI Research | Physiological Computing &amp; AI</subtitle>
    <link rel="self" type="application/atom+xml" href="https://cgutt-hub.github.io/5ha99y/blog/atom.xml"/>
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    <updated>2026-04-02T00:00:00+00:00</updated>
    <id>https://cgutt-hub.github.io/5ha99y/blog/atom.xml</id>
    <entry xml:lang="en">
        <title>New Project: labourAIVolt</title>
        <published>2026-04-02T00:00:00+00:00</published>
        <updated>2026-04-02T00:00:00+00:00</updated>
        
        <author>
          <name>
            
              Unknown
            
          </name>
        </author>
        
        <link rel="alternate" type="text/html" href="https://cgutt-hub.github.io/5ha99y/blog/new-project-labouraivolt/"/>
        <id>https://cgutt-hub.github.io/5ha99y/blog/new-project-labouraivolt/</id>
        
        <content type="html" xml:base="https://cgutt-hub.github.io/5ha99y/blog/new-project-labouraivolt/">&lt;p&gt;A new project is now available in my &lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&quot;&gt;GitHub backoffice&lt;&#x2F;a&gt;:&lt;&#x2F;p&gt;
&lt;h2 id=&quot;labouraivolt&quot;&gt;labourAIVolt&lt;&#x2F;h2&gt;
&lt;p&gt;No description&lt;&#x2F;p&gt;
&lt;p&gt;&lt;strong&gt;Language:&lt;&#x2F;strong&gt; Python&lt;&#x2F;p&gt;
&lt;p&gt;This project contains analysis pipelines, data, and documentation following my commitment to open and transparent science.&lt;&#x2F;p&gt;
&lt;p&gt;&lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;labourAIVolt&quot;&gt;View on GitHub →&lt;&#x2F;a&gt; | &lt;a href=&quot;&#x2F;projects&#x2F;&quot;&gt;See all projects →&lt;&#x2F;a&gt;&lt;&#x2F;p&gt;
</content>
        
    </entry>
    <entry xml:lang="en">
        <title>Project Update: AnalysisToolbox</title>
        <published>2026-04-02T00:00:00+00:00</published>
        <updated>2026-04-02T00:00:00+00:00</updated>
        
        <author>
          <name>
            
              Unknown
            
          </name>
        </author>
        
        <link rel="alternate" type="text/html" href="https://cgutt-hub.github.io/5ha99y/blog/update-analysistoolbox/"/>
        <id>https://cgutt-hub.github.io/5ha99y/blog/update-analysistoolbox/</id>
        
        <content type="html" xml:base="https://cgutt-hub.github.io/5ha99y/blog/update-analysistoolbox/">&lt;p&gt;Recent activity in &lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;AnalysisToolbox&quot;&gt;AnalysisToolbox&lt;&#x2F;a&gt;:&lt;&#x2F;p&gt;
&lt;h2 id=&quot;recent-commits&quot;&gt;Recent Commits&lt;&#x2F;h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;code&gt;a774319&lt;&#x2F;code&gt; feat: add zscore criterion for sample rejection; update parquet compression to g&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;c8febc1&lt;&#x2F;code&gt; fix: update configuration file references in pipelineBuilder documentation&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;a871b11&lt;&#x2F;code&gt; fix: update l2_folder parameter initialization to avoid undefined warnings&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;29d98ef&lt;&#x2F;code&gt; fix: remove duplicate pipeline_log def in finalizeParticipant; add pipeline buil&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;6b64038&lt;&#x2F;code&gt; Enhance .gitignore handling: untrack Nextflow trace and local runtime files&lt;&#x2F;li&gt;
&lt;&#x2F;ul&gt;
&lt;p&gt;This project is actively maintained as part of my commitment to open and transparent science.&lt;&#x2F;p&gt;
&lt;p&gt;&lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;AnalysisToolbox&quot;&gt;View on GitHub →&lt;&#x2F;a&gt; | &lt;a href=&quot;&#x2F;projects&#x2F;&quot;&gt;See all projects →&lt;&#x2F;a&gt;&lt;&#x2F;p&gt;
</content>
        
    </entry>
    <entry xml:lang="en">
        <title>Project Update: EmotiView</title>
        <published>2026-04-02T00:00:00+00:00</published>
        <updated>2026-04-02T00:00:00+00:00</updated>
        
        <author>
          <name>
            
              Unknown
            
          </name>
        </author>
        
        <link rel="alternate" type="text/html" href="https://cgutt-hub.github.io/5ha99y/blog/update-emotiview/"/>
        <id>https://cgutt-hub.github.io/5ha99y/blog/update-emotiview/</id>
        
        <content type="html" xml:base="https://cgutt-hub.github.io/5ha99y/blog/update-emotiview/">&lt;p&gt;Recent activity in &lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;EmotiView&quot;&gt;EmotiView&lt;&#x2F;a&gt;:&lt;&#x2F;p&gt;
&lt;h2 id=&quot;recent-commits&quot;&gt;Recent Commits&lt;&#x2F;h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;code&gt;bf62b8b&lt;&#x2F;code&gt; Deploy: Sync public files from private repository CGutt-hub&#x2F;EmotiViewPrivate@790&lt;&#x2F;li&gt;
&lt;&#x2F;ul&gt;
&lt;p&gt;This project is actively maintained as part of my commitment to open and transparent science.&lt;&#x2F;p&gt;
&lt;p&gt;&lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;EmotiView&quot;&gt;View on GitHub →&lt;&#x2F;a&gt; | &lt;a href=&quot;&#x2F;projects&#x2F;&quot;&gt;See all projects →&lt;&#x2F;a&gt;&lt;&#x2F;p&gt;
</content>
        
    </entry>
    <entry xml:lang="en">
        <title>Website Update</title>
        <published>2026-04-02T00:00:00+00:00</published>
        <updated>2026-04-02T00:00:00+00:00</updated>
        
        <author>
          <name>
            
              Unknown
            
          </name>
        </author>
        
        <link rel="alternate" type="text/html" href="https://cgutt-hub.github.io/5ha99y/blog/website-update/"/>
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        <content type="html" xml:base="https://cgutt-hub.github.io/5ha99y/blog/website-update/">&lt;p&gt;This website has been updated with the following changes:&lt;&#x2F;p&gt;
&lt;h2 id=&quot;recent-changes&quot;&gt;Recent Changes&lt;&#x2F;h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;code&gt;9fd4085&lt;&#x2F;code&gt; feat: add pipeline tree display under plots in analysis page&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;47996f4&lt;&#x2F;code&gt; feat: implement collapsible pipeline&#x2F;results tree with download option&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;a3ac0f0&lt;&#x2F;code&gt; feat: add GitHub Actions workflow for publishing analysis results without LFS po&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;10c90e8&lt;&#x2F;code&gt; feat: transparent LFS pointer resolution for parquet files&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;52268d4&lt;&#x2F;code&gt; debug: add log parsing diagnostics and line count indicator&lt;&#x2F;li&gt;
&lt;&#x2F;ul&gt;
&lt;p&gt;The site continues to sync automatically with GitHub (projects) and ORCID (publications).&lt;&#x2F;p&gt;
&lt;p&gt;&lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;5ha99y&quot;&gt;View source on GitHub →&lt;&#x2F;a&gt;&lt;&#x2F;p&gt;
</content>
        
    </entry>
    <entry xml:lang="en">
        <title>Project Update: surveyWorkbench</title>
        <published>2026-03-09T00:00:00+00:00</published>
        <updated>2026-03-09T00:00:00+00:00</updated>
        
        <author>
          <name>
            
              Unknown
            
          </name>
        </author>
        
        <link rel="alternate" type="text/html" href="https://cgutt-hub.github.io/5ha99y/blog/update-surveyworkbench/"/>
        <id>https://cgutt-hub.github.io/5ha99y/blog/update-surveyworkbench/</id>
        
        <content type="html" xml:base="https://cgutt-hub.github.io/5ha99y/blog/update-surveyworkbench/">&lt;p&gt;Recent activity in &lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;surveyWorkbench&quot;&gt;surveyWorkbench&lt;&#x2F;a&gt;:&lt;&#x2F;p&gt;
&lt;h2 id=&quot;recent-commits&quot;&gt;Recent Commits&lt;&#x2F;h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;code&gt;a9c2c92&lt;&#x2F;code&gt; Merge pull request #1 from CGutt-hub&#x2F;copilot&#x2F;create-readme-file&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;fa64129&lt;&#x2F;code&gt; Create comprehensive README with project overview, features, installation, and u&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;fd66bc3&lt;&#x2F;code&gt; Initial plan&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;dd70225&lt;&#x2F;code&gt; Add files via upload&lt;&#x2F;li&gt;
&lt;li&gt;&lt;code&gt;ea0e119&lt;&#x2F;code&gt; Initial commit&lt;&#x2F;li&gt;
&lt;&#x2F;ul&gt;
&lt;p&gt;This project is actively maintained as part of my commitment to open and transparent science.&lt;&#x2F;p&gt;
&lt;p&gt;&lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;surveyWorkbench&quot;&gt;View on GitHub →&lt;&#x2F;a&gt; | &lt;a href=&quot;&#x2F;projects&#x2F;&quot;&gt;See all projects →&lt;&#x2F;a&gt;&lt;&#x2F;p&gt;
</content>
        
    </entry>
    <entry xml:lang="en">
        <title>New Project: paperFinder</title>
        <published>2026-02-18T00:00:00+00:00</published>
        <updated>2026-02-18T00:00:00+00:00</updated>
        
        <author>
          <name>
            
              Unknown
            
          </name>
        </author>
        
        <link rel="alternate" type="text/html" href="https://cgutt-hub.github.io/5ha99y/blog/new-project-paperfinder/"/>
        <id>https://cgutt-hub.github.io/5ha99y/blog/new-project-paperfinder/</id>
        
        <content type="html" xml:base="https://cgutt-hub.github.io/5ha99y/blog/new-project-paperfinder/">&lt;p&gt;A new project is now available in my &lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&quot;&gt;GitHub backoffice&lt;&#x2F;a&gt;:&lt;&#x2F;p&gt;
&lt;h2 id=&quot;paperfinder&quot;&gt;paperFinder&lt;&#x2F;h2&gt;
&lt;p&gt;No description&lt;&#x2F;p&gt;
&lt;p&gt;&lt;strong&gt;Language:&lt;&#x2F;strong&gt; Python&lt;&#x2F;p&gt;
&lt;p&gt;This project contains analysis pipelines, data, and documentation following my commitment to open and transparent science.&lt;&#x2F;p&gt;
&lt;p&gt;&lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;paperFinder&quot;&gt;View on GitHub →&lt;&#x2F;a&gt; | &lt;a href=&quot;&#x2F;projects&#x2F;&quot;&gt;See all projects →&lt;&#x2F;a&gt;&lt;&#x2F;p&gt;
</content>
        
    </entry>
    <entry xml:lang="en">
        <title>New Publication: Neural-Autonomic Synchrony and Embodied Integration</title>
        <published>2026-02-18T00:00:00+00:00</published>
        <updated>2026-02-18T00:00:00+00:00</updated>
        
        <author>
          <name>
            
              Unknown
            
          </name>
        </author>
        
        <link rel="alternate" type="text/html" href="https://cgutt-hub.github.io/5ha99y/blog/new-publication-neural-autonomic-synchrony-and-embodied/"/>
        <id>https://cgutt-hub.github.io/5ha99y/blog/new-publication-neural-autonomic-synchrony-and-embodied/</id>
        
        <content type="html" xml:base="https://cgutt-hub.github.io/5ha99y/blog/new-publication-neural-autonomic-synchrony-and-embodied/">&lt;p&gt;A new publication is now available in my &lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;orcid.org&#x2F;0000-0002-1774-532X&quot;&gt;ORCID front office&lt;&#x2F;a&gt;:&lt;&#x2F;p&gt;
&lt;h2 id=&quot;neural-autonomic-synchrony-and-embodied-integration&quot;&gt;Neural-Autonomic Synchrony and Embodied Integration&lt;&#x2F;h2&gt;
&lt;p&gt;&lt;strong&gt;Year:&lt;&#x2F;strong&gt; 2025&lt;br &#x2F;&gt;
&lt;strong&gt;Type:&lt;&#x2F;strong&gt; Working Paper&lt;&#x2F;p&gt;
&lt;p&gt;This work represents my ongoing commitment to open and transparent science.&lt;&#x2F;p&gt;
&lt;p&gt;&lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;orcid.org&#x2F;0000-0002-1774-532X&quot;&gt;View on ORCID →&lt;&#x2F;a&gt; | &lt;a href=&quot;&#x2F;publications&#x2F;&quot;&gt;See all publications →&lt;&#x2F;a&gt;&lt;&#x2F;p&gt;
</content>
        
    </entry>
    <entry xml:lang="en">
        <title>New Project: 5ha99y</title>
        <published>2026-02-12T00:00:00+00:00</published>
        <updated>2026-02-12T00:00:00+00:00</updated>
        
        <author>
          <name>
            
              Unknown
            
          </name>
        </author>
        
        <link rel="alternate" type="text/html" href="https://cgutt-hub.github.io/5ha99y/blog/new-project-5ha99y/"/>
        <id>https://cgutt-hub.github.io/5ha99y/blog/new-project-5ha99y/</id>
        
        <content type="html" xml:base="https://cgutt-hub.github.io/5ha99y/blog/new-project-5ha99y/">&lt;p&gt;A new project is now available in my &lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&quot;&gt;GitHub backoffice&lt;&#x2F;a&gt;:&lt;&#x2F;p&gt;
&lt;h2 id=&quot;5ha99y&quot;&gt;5ha99y&lt;&#x2F;h2&gt;
&lt;p&gt;No description&lt;&#x2F;p&gt;
&lt;p&gt;&lt;strong&gt;Language:&lt;&#x2F;strong&gt; Python&lt;&#x2F;p&gt;
&lt;p&gt;This project contains analysis pipelines, data, and documentation following my commitment to open and transparent science.&lt;&#x2F;p&gt;
&lt;p&gt;&lt;a rel=&quot;external&quot; href=&quot;https:&#x2F;&#x2F;github.com&#x2F;CGutt-hub&#x2F;5ha99y&quot;&gt;View on GitHub →&lt;&#x2F;a&gt; | &lt;a href=&quot;&#x2F;projects&#x2F;&quot;&gt;See all projects →&lt;&#x2F;a&gt;&lt;&#x2F;p&gt;
</content>
        
    </entry>
    <entry xml:lang="en">
        <title>Welcome to My Research Hub</title>
        <published>2026-02-11T00:00:00+00:00</published>
        <updated>2026-02-11T00:00:00+00:00</updated>
        
        <author>
          <name>
            
              Unknown
            
          </name>
        </author>
        
        <link rel="alternate" type="text/html" href="https://cgutt-hub.github.io/5ha99y/blog/welcome/"/>
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        <content type="html" xml:base="https://cgutt-hub.github.io/5ha99y/blog/welcome/">&lt;p&gt;This website serves as my central scientific presence, automatically syncing with GitHub (active projects), ORCID (publications), and other platforms.&lt;&#x2F;p&gt;
&lt;h2 id=&quot;what-to-expect&quot;&gt;What to Expect&lt;&#x2F;h2&gt;
&lt;p&gt;This blog will feature:&lt;&#x2F;p&gt;
&lt;ul&gt;
&lt;li&gt;&lt;strong&gt;Research updates&lt;&#x2F;strong&gt; — Progress on neural-autonomic synchrony and consciousness research&lt;&#x2F;li&gt;
&lt;li&gt;&lt;strong&gt;Volt engagement&lt;&#x2F;strong&gt; — Data analytics and digital policy insights&lt;&#x2F;li&gt;
&lt;li&gt;&lt;strong&gt;Technical insights&lt;&#x2F;strong&gt; — Tools, methods, and open science practices&lt;&#x2F;li&gt;
&lt;li&gt;&lt;strong&gt;CCC reflections&lt;&#x2F;strong&gt; — Digital rights and technological transparency&lt;&#x2F;li&gt;
&lt;&#x2F;ul&gt;
&lt;h2 id=&quot;philosophy&quot;&gt;Philosophy&lt;&#x2F;h2&gt;
&lt;p&gt;Everything here operates on principles of &lt;strong&gt;open and transparent science&lt;&#x2F;strong&gt;. Code, data, and ideas are shared to advance collaborative knowledge.&lt;&#x2F;p&gt;
&lt;hr &#x2F;&gt;
&lt;p&gt;&lt;em&gt;To add new posts, simply create a markdown file in &lt;code&gt;content&#x2F;blog&#x2F;&lt;&#x2F;code&gt; with this format and commit to GitHub.&lt;&#x2F;em&gt;&lt;&#x2F;p&gt;
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